Title of the dataset:
Data for "Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae "

Creators:
Viola Kurm, Wageningen University & Research, Biointeractions and Plant Health
ORCID 0000-0003-1261-9778	
Odette Mendes, Wageningen University & Research, Biointeractions and Plant Health
Jack Gros, Agrico
Jan van der Wolf, Wageningen University & Research, Biointeractions and Plant Health
ORCID 0000-0002-9196-5419

Related publication:
Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae (in press)

Description:
In this study differences in disease incidence between potato seed lots inoculated with soft rot Pectobacteriaceae were assessed in two years. 
Subsequently the microbial communities in tubers and soils from seed lots with a low and high disease incidence were determined by amplicon sequencing. 

Keywords:
soil microbiome
plant disease resistance
SRP
Solanum tuberosum

Spatial coverage:
Munnekezijl and Kollumerzwaag, Netherlands

Temporal coverage:
2018 and 2019

This dataset contains the following files:

Description OTU and taxa tables.csv	-	Contains information on files
Description of Disease incidence data 2018,2019 project Potato resistance.csv
Disease incidence data 2018 project Potato resistance.csv
Disease incidence data 2019 project Potato resistance.csv
Metadata.csv
OTU_16S_2019_Soil.csv
OTU_16S_2019_SoilandTuber.csv
OTU_16S_2019_Tuber.csv
OTU_16S_20182019_Tuber.csv
OTU_ITS_2019_Soil.csv
OTU_ITS_2019_Tuber.csv
OTU_ITS_20182019_Tuber.csv
Taxa_16S_2019.csv
Taxa_16S_2019_Soil.csv
Taxa_16S_2019_Tuber.csv
Taxa_16S_20182019.csv
Taxa_ITS_2019_Soil.csv
Taxa_ITS_2019_Tuber.csv
Taxa_ITS_20182019.csv

Explanation of variables:

Explanation of variables is found in the following files
Description of Disease incidence data 2018,2019 project Potato resistance.csv
Description OTU and taxa tables.csv

Methods, materials and software:
Can be found in the publication 

This dataset is published under the CC BY (Attribution) license.
This license allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator.

