Data for "Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae"
Datacite citation style
Viola Kurm; Odette Mendes; Jack Gros; Jan van der Wolf (2022): Data for "Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae". Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/19237146.v1
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Dataset
Version 2 - 2023-10-04 (latest)
Version 1 - 2022-03-01
Usage statistics
1098
views
1047
downloads
Geolocation
Munnekezijl and Kollumerzwaag, Netherlands
Time coverage 2018 and 2019
Licence CC BY 4.0
Interoperability
In this study differences in disease incidence between potato seed lots inoculated with soft rot Pectobacteriaceae were assessed in two years.
Subsequently the microbial communities in tubers and soils from seed lots with a low and high disease incidence were determined by amplicon sequencing.
Subsequently the microbial communities in tubers and soils from seed lots with a low and high disease incidence were determined by amplicon sequencing.
History
- 2022-03-01 first online, published, posted
Publisher
4TU.ResearchDataFormat
csv xlsx txtOrganizations
Biointeractions and Plant Health, Wageningen University & ResearchAgrico
DATA
Files (19)
- 2,294 bytesMD5:
25e311d1870c3e8b1d3ebba84da0a33fREADME.txt - 1,313 bytesMD5:
444dc55a90ac863599a0a29ddcd38be7Description of Disease incidence data 2018,2019 project Potato resistance.csv - 3,894 bytesMD5:
59004395c0abac4461bad73d0fbbcc73Description OTU and taxa tables.csv - 39,903 bytesMD5:
afc29df35f12ec5acfcd2a7c14226890Disease incidence data 2018 project Potato resistance.csv - 20,946 bytesMD5:
f3dfd4e31abc5912a0b288f7efdc35c2Disease incidence data 2019 project Potato resistance.csv - 5,105 bytesMD5:
17bf772592a51ce8fa1159d2d5df572bMetadata.csv - 1,584,057 bytesMD5:
bb44568d29abd5744e3b44db79f9db27OTU_16S_20182019_Tuber.csv - 737,417 bytesMD5:
592d5e9f555d90166adfed54a53707f2OTU_16S_2019_Soil.csv - 1,621,351 bytesMD5:
01a34713813f7f632b4efde78290960fOTU_16S_2019_SoilandTuber.csv - 394,385 bytesMD5:
77eba99d36f1132570ce0fde6d3396e0OTU_16S_2019_Tuber.csv - 103,756 bytesMD5:
1994eede9607500459b1d6663e222d23OTU_ITS_20182019_Tuber.csv - 1,061,864 bytesMD5:
f50b8a00d207a79b93e2fc5be2b558fdOTU_ITS_2019_Soil.csv - 22,786 bytesMD5:
2e6017672a9ee450bd8bda324f60a589OTU_ITS_2019_Tuber.csv - 407,339 bytesMD5:
00a4c474887ef3c592f90f13be751c27Taxa_16S_20182019.csv - 328,066 bytesMD5:
709ec6aa6e83cac1c4082244920ae1b2Taxa_16S_2019_Soil.csv - 273,574 bytesMD5:
0b4e2a3e874c06a1d382281f47852265Taxa_16S_2019_Tuber.csv - 30,219 bytesMD5:
2a1e0fcaef00cedba56c97ca8088efdeTaxa_ITS_20182019.csv - 108,407 bytesMD5:
1aa4782ba36e6f357980cc335a78a3e5Taxa_ITS_2019_Soil.csv - 64,775 bytesMD5:
46725958fa3338c26525301237aebeddTaxa_ITS_2019_Tuber.csv -
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