Dataset underlying the publication: "MoGAAAP: A modular Snakemake workflow for automated genome assembly and annotation with quality assessment"

Datacite citation style

van Workum, Dirk-Jan M.; Dey, Kuntal K.; Kozik, Alexander; Lavelle, Dean; de Ridder, Dick et. al. (2025): Dataset underlying the publication: "MoGAAAP: A modular Snakemake workflow for automated genome assembly and annotation with quality assessment". Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/4b39da65-2eef-4e05-8583-25f8850cf932.v1
Other citation styles (APA, Harvard, MLA, Vancouver, Chicago, IEEE) available at Datacite

Dataset

Version 2 - 2025-06-04 (latest)
Version 1 - 2025-02-17

Supplementary data belonging to "MoGAAAP: A modular Snakemake workflow for automated genome assembly and annotation with quality assessment". For demonstrating the applicability of the MoGAAAP workflow to different eukaryotic species, we ran it for L. serriola, A. thaliana, grapevine and human example datasets. For reproducibility, we provide a README with the details on the input files of the pipeline runs and the HTML reports that were produced by the pipeline.

History

  • 2025-02-17 first online, published, posted

Publisher

4TU.ResearchData

Format

HTML

Organizations

Bioinformatics Group, Wageningen University & Research
Genome Center and Department of Plant Sciences, University of California, Davis
Biosystematics Group, Wageningen University & Research

DATA

Files (5)